Recent Publications

Balaban AE, Nguyen LTS, Parajón E, Robinson DN., 2023, Nonmuscle myosin IIB is a driver of cellular reprogramming, Mol Biol Cell., 34(7):ar71. doi: 10.1091/mbc.E21-08-0386. PMID: 37074945  PubMed

Figueroa-Cuilan WM, Irazoki O, Feeley M, Smith E, Nguyen T, Cava F, Goley ED., 2023, Quantitative analysis of morphogenesis and growth dynamics in an obligate intracellular bacterium, Mol Biol Cell., 34(7):ar69. doi: 10.1091/mbc.E23-01-0023. PMID: 37017481  PubMed

Haile ST, Rahman S, Fields JK, Orsburn BC, Bumpus NN, Wolberger C., 2023, The SAGA HAT module is tethered by its SWIRM domain and modulates activity of the SAGA DUB module, Biochim Biophys Acta Gene Regul Mech., 1866(2):194929. doi: 10.1016/j.bbagrm.2023.194929. PMCID: PMC10226619  PubMed

Le TT, Wu M, Lee JH, Bhatt N, Inman JT, Berger JM, Wang MD., 2023, Etoposide promotes DNA loop trapping and barrier formation by topoisomerase II, Nat Chem Biol., 19(5):641-650. doi: 10.1038/s41589-022-01235-9. PMCID: PMC10154222  PubMed

Bohlen JF, Cleary CM, Das D, Sripathy SR, Sadowski N, Shim G, Kenney RF, Buchler IP, Banerji T, Scanlan TS, Mulkey DK, Maher BJ., 2023, Promyelinating drugs promote functional recovery in an autism spectrum disorder mouse model of Pitt-Hopkins syndrome, Brain., awad057. doi: 10.1093/brain/awad057. PMID: 37068912  PubMed

Yang J, Chen J, Liu Y, Chen KH, Baraban JM, Qiu Z., 2023, Ventral tegmental area astrocytes modulate cocaine reward by tonically releasing GABA, Neuron., 111(7):1104-1117.e6. doi: 10.1016/j.neuron.2022.12.033. PMCID: PMC10079641  PubMed

Wang X, Raman N, Lemtiri-Chlieh G, Chang J, Jagtap S, Chowdhury DD, Ballew M, Carrieri FA, Nguyen T, Nugent K, Peck T, Levine MS, Chan A, Lam C, Malek R, Hoang T, Phillips R, Cheng Z, Taparra K, Connis N, Hann CL, Holland A, Tran PT, Lafargue A, Wang H., 2023, Griseofulvin Radiosensitizes Non-Small Cell Lung Cancer Cells and Activates cGAS, Mol Cancer Ther., 22(4):519-528. doi: 10.1158/1535-7163.MCT-22-0191. PMCID: PMC10073282  PubMed

Chu J, Yang J, Zhou Y, Chen J, Chen KH, Zhang C, Cheng HY, Koylass N, Liu JO, Guan Y, Qiu Z., 2023, ATP-releasing SWELL1 channel in spinal microglia contributes to neuropathic pain, Sci Adv., 9(13):eade9931. doi: 10.1126/sciadv.ade9931. PMCID: PMC10058245  PubMed

Harris JR, Gao CW, Britton JF, Applegate CD, Bjornsson HT, Fahrner JA., 2023, Five years of experience in the Epigenetics and Chromatin Clinic: what have we learned and where do we go from here?, Hum Genet., 1–18. doi: 10.1007/s00439-023-02537-1. PMCID: PMC10034257  PubMed

Balamurugan K, Poria DK, Sehareen SW, Krishnamurthy S, Tang W, McKennett L, Padmanaban V, Czarra K, Ewald AJ, Ueno NT, Ambs S, Sharan S, Sterneck E., 2023, Stabilization of E-cadherin adhesions by COX-2/GSK3β signaling is a targetable pathway in metastatic breast cancer, JCI Insight, 8(6):e156057. doi: 10.1172/jci.insight.156057. PMCID: PMC10070121  PubMed

White JA, Wu F, Yasin S, Moskovljevic M, Varriale J, Dragoni F, Camilo-Contreras A, Duan J, Zheng MY, Tadzong NF, Patel HB, Quiambao JMC, Rhodehouse K, Zhang H, Lai J, Beg SA, Delannoy M, Kilcrease C, Hoffmann CJ, Poulin S, Chano F, Tremblay C, Cherian J, Barditch-Crovo P, Chida N, Moore RD, Summers MF, Siliciano RF, Siliciano JD, Simonetti FR., 2023, Clonally expanded HIV-1 proviruses with 5′-leader defects can give rise to nonsuppressible residual viremia, J Clin Invest., 133(6):e165245. doi: 10.1172/JCI165245. PMCID: PMC10014112  PubMed

White JA, Wu F, Yasin S, Moskovljevic M, Varriale J, Dragoni F, Camilo-Contreras A, Duan J, Zheng MY, Tadzong NF, Patel HB, Quiambao JMC, Rhodehouse K, Zhang H, Lai J, Beg SA, Delannoy M, Kilcrease C, Hoffmann CJ, Poulin S, Chano F, Tremblay C, Cherian J, Barditch-Crovo P, Chida N, Moore RD, Summers MF, Siliciano RF, Siliciano JD, Simonetti FR., 2023, Clonally expanded HIV-1 proviruses with 5′-leader defects can give rise to nonsuppressible residual viremia, J Clin Invest., 133(6):e165245. doi: 10.1172/JCI165245. PMCID: PMC10014112  PubMed

Fray EJ, Wu F, Simonetti FR, Zitzmann C, Sambaturu N, Molina-Paris C, Bender AM, Liu PT, Ventura JD, Wiseman RW, O’Connor DH, Geleziunas R, Leitner T, Ribeiro RM, Perelson AS, Barouch DH, Siliciano JD, Siliciano RF., 2023, Antiretroviral therapy reveals triphasic decay of intact SIV genomes and persistence of ancestral variants, Cell Host Microbe., 31(3):356-372.e5. doi: 10.1016/j.chom.2023.01.016. PMID: 36809762  PubMed

Serey-Gaut M, Cortes M, Makrythanasis P, Suri M, Taylor AMR, Sullivan JA, Asleh AN, Mitra J, Dar MA, McNamara A, Shashi V, Dugan S, Song X, Rosenfeld JA, Cabrol C, Iwaszkiewicz J, Zoete V, Pehlivan D, Akdemir ZC, Roeder ER, Littlejohn RO, Dibra HK, Byrd PJ, Stewart GS, Geckinli BB, Posey J, Westman R, Jungbluth C, Eason J, Sachdev R, Evans CA, Lemire G, VanNoy GE, O’Donnell-Luria A, Mau-Them FT, Juven A, Piard J, Nixon CY, Zhu Y, Ha T, Buckley MF, Thauvin C, Essien Umanah GK, Van Maldergem L, Lupski JR, Roscioli T, Dawson VL, Dawson TM, Antonarakis SE., 2023, Bi-allelic TTI1 variants cause an autosomal-recessive neurodevelopmental disorder with microcephaly, Am J Hum Genet., 110(3):499-515. doi: 10.1016/j.ajhg.2023.01.006. PMCID: PMC10027477  PubMed

Wheeler AM, Eberhard CD, Mosher EP, Yuan Y, Wilkins HN, Seneviratne HK, Orsburn BC, Bumpus NN., 2023, Achieving a Deeper Understanding of Drug Metabolism and Responses Using Single-Cell Technologies, Drug Metab Dispos., 51(3):350-359. doi: 10.1124/dmd.122.001043. PMCID: PMC10029823  PubMed

Powell BH, Turchinovich A, Wang Y, Gololobova O, Buschmann D, Zeiger MA, Umbricht CB, Witwer KW., 2023, miR-210 Expression Is Strongly Hypoxia-Induced in Anaplastic Thyroid Cancer Cell Lines and Is Associated with Extracellular Vesicles and Argonaute-2, Int J Mol Sci., 24(5):4507. doi: 10.3390/ijms24054507. PMCID: PMC10002857  PubMed

Barrows JM, Goley ED., 2023, Synchronized Swarmers and Sticky Stalks: Caulobacter crescentus as a Model for Bacterial Cell Biology, J Bacteriol., 205(2):e0038422. doi: 10.1128/jb.00384-22. PMCID: PMC9945503  PubMed

Allen G, Weiss B, Panasenko OO, Huch S, Villanyi Z, Albert B, Dilg D, Zagatti M, Schaughency P, Liao SE, Corden J, Polte C, Shore D, Ignatova Z, Pelechano V, Collart MA., 2023, Not1 and Not4 inversely determine mRNA solubility that sets the dynamics of co-translational events, Genome Biol., 24(1):30. doi: 10.1186/s13059-023-02871-7. PMCID: PMC9940351  PubMed

Raz AA, Vida GS, Stern SR, Mahadevaraju S, Fingerhut JM, Viveiros JM, Pal S, Grey JR, Grace MR, Berry CW, Li H, Janssens J, Saelens W, Shao Z, Hu C, Yamashita YM, Przytycka T, Oliver B, Brill JA, Krause H, Matunis EL, White-Cooper H, DiNardo S, Fuller MT., 2023, Emergent dynamics of adult stem cell lineages from single nucleus and single cell RNA-Seq of Drosophila testes, Elife., 12:e82201. doi: 10.7554/eLife.82201. PMCID: PMC9934865  PubMed

Laffin JM, Shao W, Espenshade PJ., 2023, Commercial lipoprotein-deficient sera differ in iron content, Biochim Biophys Acta Mol Cell Biol Lipids, 1868(2):159260. doi: 10.1016/j.bbalip.2022.159260. PMCID: PMC9772235  PubMed

Wattez JS, Eury E, Hazen BC, Wade A, Chau S, Ou SC, Russell AP, Cho Y, Kralli A., 2023, Loss of skeletal muscle estrogen-related receptors leads to severe exercise intolerance, Mol Metab., 68:101670. doi: 10.1016/j.molmet.2023.101670. PMCID: PMC9938320  PubMed

Statzu M, Jin W, Fray EJ, Wong AKH, Kumar MR, Ferrer E, Docken SS, Pinkevych M, McBrien JB, Fennessey CM, Keele BF, Liang S, Harper JL, Mutascio S, Franchitti L, Wang H, Cicetti D, Bosinger SE, Carnathan DG, Vanderford TH, Margolis DM, Garcia-Martinez JV, Chahroudi A, Paiardini M, Siliciano J, Davenport MP, Kulpa DA, Siliciano RS, Silvestri G., 2023, CD8⁺ lymphocytes do not impact SIV reservoir establishment under ART, Nat Microbiol., 8(2):299-308. doi: 10.1038/s41564-022-01311-9. PMCID: PMC9894752  PubMed

Yeung N, Murata D, Iijima M, Sesaki H., 2023, Role of human HSPE1 for OPA1 processing independent of HSPD1, iScience, 26(2):106067. doi: 10.1016/j.isci.2023.106067. PMCID: PMC9929679  PubMed

Sadashivaiah V, Tippani M, Page SC, Kwon SH, Bach SV, Bharadwaj RA, Hyde TM, Kleinman JE, Jaffe AE, Maynard KR., 2023, SUFI: an automated approach to spectral unmixing of fluorescent multiplex images captured in mouse and post-mortem human brain tissues, BMC Neurosci., 24(1):6. doi: 10.1186/s12868-022-00765-1. PMCID: PMC9878864  PubMed

Gaido OER, Nkashama LJ, Schole KL, Wang Q, Umapathi P, Mesubi OO, Konstantinidis K, Luczak ED, Anderson ME., 2022, CaMKII as a Therapeutic Target in Cardiovascular Disease, Annu Rev Pharmacol Toxicol., doi: 10.1146/annurev-pharmtox-051421-111814. PMID: 35973713  PubMed

Hunyara JL, Foshe S, Varadarajan SG, Gribble KD, Huberman AD, Kolodkin AL., 2023, Corrigendum to “Characterization of non-alpha retinal ganglion cell injury responses reveals a possible block to restoring ipRGC function”, Exp Neurol., 359:114256. doi: 10.1016/j.expneurol.2022.114256. PMID: 36457222  PubMed

McGuire MR, Espenshade PJ., 2023, PGRMC1: An enigmatic heme-binding protein, Pharmacol Ther., 2023 Jan;241:108326. doi: 10.1016/j.pharmthera.2022.108326. PMCID: PMC9839567  PubMed

Gordon MR, Zhu J, Sun G, Li R., 2023, Suppression of chromosome instability by targeting a DNA helicase in budding yeast, Mol Biol Cell., 34(1):ar3. doi: 10.1091/mbc.E22-09-0395. PMCID: PMC9816644  PubMed

Vasavda C, Tang O, Kwatra SG, Ho BK, Grossberg AL., 2023, Asymmetric patterns of patient access to in-person and teledermatologic health care during the COVID-19 pandemic, J Am Acad Dermatol., 2023 Jan;88(1):167-169. doi: 10.1016/j.jaad.2021.12.025. Epub 2021 Dec 18. PMCID: PMC9726204.  PubMed

Shaver A, Mahlum JD, Scida K, Johnston ML, Aller Pellitero M, Wu Y, Carr GV, Arroyo-Currás N., 2022, Optimization of Vancomycin Aptamer Sequence Length Increases the Sensitivity of Electrochemical, Aptamer-Based Sensors In Vivo, ACS Sens., 7(12):3895-3905. doi: 10.1021/acssensors.2c01910. PMCID: PMC9791989  PubMed

Osei-Owusu J, Ruan Z, Mihaljević L, Matasic DS, Chen KH, Lü W, Qiu Z,2022, Molecular mechanism underlying desensitization of the proton-activated chloride channel PAC, Elife., 11:e82955. doi: 10.7554/eLife.82955. PMCID: PMC9779784  PubMed

Yeung N, Iijima M, Sesaki H., 2022, An AAA-ATPase links mitochondrial division with DNA nucleoids, Proc Natl Acad Sci U S A, 119(51):e2217949119. doi: 10.1073/pnas.2217949119. PMCID: PMC9907133  PubMed

So J, Sudlow S, Sayeed A, Grudda T, Deborggraeve S, Ngoyi DM, Desamber DK, Wickstead B, Lejon V, Mugnier MR., 2022, VSGs Expressed during Natural T. b. gambiense Infection Exhibit Extensive Sequence Divergence and a Subspecies-Specific Bias towards Type B N-Terminal Domains, mBio., 13(6):e0255322. doi: 10.1128/mbio.02553-22. PMCID: PMC9765701  PubMed

Vettkötter D, Schneider M, Goulden BD, Dill H, Liewald J, Zeiler S, Guldan J, Ateş YA, Watanabe S, Gottschalk A., 2022, Rapid and reversible optogenetic silencing of synaptic transmission by clustering of synaptic vesicles, Nat Commun., 13(1):7827. doi: 10.1038/s41467-022-35324-z. PMCID: PMC9763335  PubMed

Plaza-Rodríguez AI, Nguyen LTS, Robinson DN, Iglesias PA., 2022, Particle-based model of mechanosensory contractility kit assembly, Biophys J., 2022 Dec 6;121(23):4600-4614. doi: 10.1016/j.bpj.2022.10.031. PMCID: PMC9748368  PubMed

Huang Y, Driedonks TAP, Cheng L, Rajapaksha H, Routenberg DA, Nagaraj R, Redding J, Arab T, Powell BH, Pletniková O, Troncoso JC, Zheng L, Hill AF, Mahairaki V, Witwer KW., 2022, Brain Tissue-Derived Extracellular Vesicles in Alzheimer’s Disease Display Altered Key Protein Levels Including Cell Type-Specific Markers, J Alzheimers Dis., 90(3):1057-1072. doi: 10.3233/JAD-220322. PMCID: PMC9741741  PubMed

Zamani M, Cheng YH, Charbonier F, Gupta VK, Mayer AT, Trevino AE, Quertermous T, Chaudhuri O, Cahan P, Huang NF., 2022, Single-Cell Transcriptomic Census of Endothelial Changes Induced by Matrix Stiffness and the Association with Atherosclerosis, Adv Funct Mater., 32(47):2203069. doi: 10.1002/adfm.202203069. PMCID: PMC9937733  PubMed

Peterson AF, Ingram K, Huang EJ, Parksong J, McKenney C, Bever GS, Regot S., 2022, Systematic analysis of the MAPK signaling network reveals MAP3K-driven control of cell fate, Cell Syst., 13(11):885-894.e4. doi: 10.1016/j.cels.2022.10.003. PMCID: PMC9923805  PubMed

Asrani K, Woo J, Mendes AA, Schaffer E, Vidotto T, Villanueva CR, Feng K, Oliveira L, Murali S, Liu HB, Salles DC, Lam B, Argani P, Lotan TL., 2022, An mTORC1-mediated negative feedback loop constrains amino acid-induced FLCN-Rag activation in renal cells with TSC2 loss, Nat Commun., 13(1):6808. doi: 10.1038/s41467-022-34617-7. PMCID: PMC9649702  PubMed

Jeong J, Lee JH, Carcamo CC, Parker MW, Berger JM., 2022, DNA-Stimulated Liquid-Liquid phase separation by eukaryotic topoisomerase ii modulates catalytic function, Elife., 11:e81786. doi: 10.7554/eLife.81786. PMCID: PMC9674351  PubMed

Nguyen LTS, Robinson DN., 2022, The lectin Discoidin I acts in the cytoplasm to help assemble the contractile machinery, J Cell Biol., 221(11):e202202063. doi: 10.1083/jcb.202202063. PMID: 36165849  PubMed

Cassani M, Seydoux G., 2022, Specialized germline P-bodies are required to specify germ cell fate in Caenorhabditis elegans embryos, Development, 149(21):dev200920. doi: 10.1242/dev.200920. PMCID: PMC9686995  PubMed

Hunyara JL, Foshe S, Varadarajan SG, Gribble KD, Huberman AD, Kolodkin AL., 2022, Characterization of non-alpha retinal ganglion cell injury responses reveals a possible block to restoring ipRGC function, Exp Neurol., 357:114176. doi: 10.1016/j.expneurol.2022.114176. PMID: 35870522  PubMed

Huang Y, Driedonks TAP, Cheng L, Rajapaksha H, Turchinovich A, Routenberg DA, Nagaraj R, Redding-Ochoa J, Arab T, Powell BH, Pletnikova O, Troncoso JC, Zheng L, Hill AF, Mahairaki V, Witwer KW., 2022, Relationships of APOE Genotypes With Small RNA and Protein Cargo of Brain Tissue Extracellular Vesicles From Patients With Late-Stage AD, Neurol Genet., 8(6):e200026. doi: 10.1212/NXG.0000000000200026. PMCID: PMC9667865  PubMed

Yeh JX, Fan Y, Bartlett ML, Zhang X, Sadowski N, Hauer DA, Timp W, Griffin DE., 2022, Treatment of Sindbis Virus-Infected Neurons with Antibody to E2 Alters Synthesis of Complete and nsP1-Expressing Defective Viral RNAs, mBio., e0222122. doi: 10.1128/mbio.02221-22. PMID: 36069441  PubMed

Nitika, Zheng B, Ruan L, Kline JT, Omkar S, Sikora J, Texeira Torres M, Wang Y, Takakuwa JE, Huguet R, Klemm C, Segarra VA, Winters MJ, Pryciak PM, Thorpe PH, Tatebayashi K, Li R, Fornelli L, Truman AW., 2022, Comprehensive characterization of the Hsp70 interactome reveals novel client proteins and interactions mediated by posttranslational modifications, PLoS Biol., 20(10):e3001839. doi: 10.1371/journal.pbio.3001839. PMCID: PMC9629621  PubMed

Al-Khindi T, Sherman MB, Kodama T, Gopal P, Pan Z, Kiraly JK, Zhang H, Goff LA, du Lac S, Kolodkin AL., 2022, The transcription factor Tbx5 regulates direction-selective retinal ganglion cell development and image stabilization, Curr Biol., S0960-9822(22)01213-1. doi: 10.1016/j.cub.2022.07.064. PMID: 35998637  PubMed

Nguyen LTS, Jacob MAC, Parajón E, Robinson DN., 2022, Cancer as a biophysical disease: Targeting the mechanical-adaptability program, Biophys J., S0006-3495(22)00367-8. doi: 10.1016/j.bpj.2022.04.039. PMID: 35505610  PubMed

Shaikh FY, Gills JJ, Mohammad F, White JR, Stevens CM, Ding H, Fu J, Tam A, Blosser RL, Domingue JC, Larman TC, Chaft JE, Spicer JD, Reuss JE, Naidoo J, Forde PM, Ganguly S, Housseau F, Pardoll DM, Sears CL., 2022, Murine fecal microbiota transfer models selectively colonize human microbes and reveal transcriptional programs associated with response to neoadjuvant checkpoint inhibitors, Cancer Immunol Immunother., 71(10):2405-2420. doi: 10.1007/s00262-022-03169-6. PMCID: PMC9411268  PubMed

Ling JP, Bygrave AM, Santiago CP, Carmen-Orozco RP, Trinh VT, Yu M, Li Y, Liu Y, Bowden KD, Duncan LH, Han J, Taneja K, Dongmo R, Babola TA, Parker P, Jiang L, Leavey PJ, Smith JJ, Vistein R, Gimmen MY, Dubner B, Helmenstine E, Teodorescu P, Karantanos T, Ghiaur G, Kanold PO, Bergles D, Langmead B, Sun S, Nielsen KJ, Peachey N, Singh MS, Dalton WB, Rajaii F, Huganir RL, Blackshaw S., 2022, Cell-specific regulation of gene expression using splicing-dependent frameshifting, Nat Commun., 2022 Oct 1;13(1):5773. doi: 10.1038/s41467-022-33523-2. PMCID: PMC9526712  PubMed

Lyu Z, Yahashiri A, Yang X, McCausland JW, Kaus GM, McQuillen R, Weiss DS, Xiao J., 2022, FtsN maintains active septal cell wall synthesis by forming a processive complex with the septum-specific peptidoglycan synthases in E. coli, Nat Commun., 2022 Sep 30;13(1):5751. doi: 10.1038/s41467-022-33404-8. PMCID: PMC9525312  PubMed

Chen KH, Qiu Z., 2022, Sensational astrocytes: Mechanotransduction in adult brain function, Neuron., 110(18):2891-2893. doi: 10.1016/j.neuron.2022.08.007. PMID: 36137517  PubMed

Dong X, Limjunyawong N, Sypek EI, Wang G, Ortines RV, Youn C, Alphonse MP, Dikeman D, Wang Y, Lay M, Kothari R, Vasavda C, Pundir P, Goff L, Miller LS, Lu W, Garza LA, Kim BS, Archer NK, Dong X., 2022, Keratinocyte-derived defensins activate neutrophil-specific receptors Mrgpra2a/b to prevent skin dysbiosis and bacterial infection, Immunity., 55(9):1645-1662.e7. doi: 10.1016/j.immuni.2022.06.021. PMCID: PMC9474599  PubMed

Johnston ML, Bonett EM, DeColli AA, Freel Meyers CL., 2022, Antibacterial Target DXP Synthase Catalyzes the Cleavage of d-Xylulose 5-Phosphate: a Study of Ketose Phosphate Binding and Ketol Transfer Reaction, Biochemistry, 61(17):1810-1823. doi: 10.1021/acs.biochem.2c00274. PMID: 35998648  PubMed

Zou RS, Marin-Gonzalez A, Liu Y, Liu HB, Shen L, Dveirin RK, Luo JXJ, Kalhor R, Ha T., 2022, Massively parallel genomic perturbations with multi-target CRISPR interrogates Cas9 activity and DNA repair at endogenous sites, Nat Cell Biol., 24(9):1433-1444. doi: 10.1038/s41556-022-00975-z. PMCID: PMC9481459  PubMed

Umanah GKE, Abalde-Atristain L, Khan MR, Mitra J, Dar MA, Chang M, Tangella K, McNamara A, Bennett S, Chen R, Aggarwal V, Cortes M, Worley PF, Ha T, Dawson TM, Dawson VL., 2022, AAA + ATPase Thorase inhibits mTOR signaling through the disassembly of the mTOR complex 1, Nat Commun., 13(1):4836. doi: 10.1038/s41467-022-32365-2. PMCID: PMC9385847  PubMed

Vasavda C, Xu R, Liew J, Kothari R, Dhindsa RS, Semenza ER, Paul BD, Green DP, Sabbagh MF, Shin JY, Yang W, Snowman AM, Albacarys LK, Moghekar A, Pardo-Villamizar CA, Luciano M, Huang J, Bettegowda C, Kwatra SG, Dong X, Lim M, Snyder SH., 2022, Identification of the NRF2 transcriptional network as a therapeutic target for trigeminal neuropathic pain, Sci Adv., 8(31):eabo5633. doi: 10.1126/sciadv.abo5633. PMCID: PMC9348805  PubMed

Osei-Owusu J, Kots E, Ruan Z, Mihaljević L, Chen KH, Tamhaney A, Ye X, Lü W, Weinstein H, Qiu Z., 2022, Molecular determinants of pH sensing in the proton-activated chloride channel, Proc Natl Acad Sci U S A., 119(31):e2200727119. doi: 10.1073/pnas.2200727119. PMCID: PMC9351481  PubMed

Osei-Owusu J, Kots E, Ruan Z, Mihaljević L, Chen KH, Tamhaney A, Ye X, Lü W, Weinstein H, Qiu Z., 2022, Molecular determinants of pH sensing in the proton-activated chloride channel, Proc Natl Acad Sci U S A, 2022 Aug 2;119(31):e2200727119. doi: 10.1073/pnas.2200727119. PMCID: PMC9351481  PubMed

Veltri AJ, D’Orazio KN, Lessen LN, Loll-Krippleber R, Brown GW, Green R., 2022, Distinct elongation stalls during translation are linked with distinct pathways for mRNA degradation, Elife, 11:e76038. doi: 10.7554/eLife.76038. PMCID: PMC9352352  PubMed

Carcamo CC, Poyton MF, Ranjan A, Park G, Louder RK, Feng XA, Kim JM, Dzu T, Wu C, Ha T., 2022, ATP binding facilitates target search of SWR1 chromatin remodeler by promoting one-dimensional diffusion on DNA, Elife, 11:e77352. doi: 10.7554/eLife.77352. PMCID: PMC9365391  PubMed

Duan L, Zaepfel BL, Aksenova V, Dasso M, Rothstein JD, Kalab P, Hayes LR., 2022, Nuclear RNA binding regulates TDP-43 nuclear localization and passive nuclear export, Cell Rep., 40(3):111106. doi: 10.1016/j.celrep.2022.111106. PMCID: PMC9345261  PubMed

Pham MT, Gupta A, Gupta H, Vaghasia A, Skaist A, Garrison MA, Coulter JB, Haffner MC, Zheng SL, Xu J, DeStefano Shields C, Isaacs WB, Wheelan SJ, Nelson WG, Yegnasubramanian S., 2022, Identifying Phased Mutations and Complex Rearrangements in Human Prostate Cancer Cell Lines through Linked-Read Whole-Genome Sequencing, Mol Cancer Res., 20(7):1013-1020. doi: 10.1158/1541-7786.MCR-21-0683. PMCID: PMC9262859  PubMed

Spead O, Zaepfel BL, Rothstein JD. Nuclear Pore Dysfunction in Neurodegeneration. Neurotherapeutics. 2022 Jul;19(4):1050-1060. doi: 10.1007/s13311-022-01293-w. PMCID: PMC9587172 PubMed

Vandiver AR, Pielstick B, Gilpatrick T, Hoang AN, Vernon HJ, Wanagat J, Timp W., 2022, Long read mitochondrial genome sequencing using Cas9-guided adaptor ligation, Mitochondrion, 65:176-183. doi: 10.1016/j.mito.2022.06.003. PMCID: PMC9399971  PubMed

Allen J, Rosendahl Huber A, Pleguezuelos-Manzano C, Puschhof J, Wu S, Wu X, Boot C, Saftien A, O’Hagan HM, Wang H, van Boxtel R, Clevers H, Sears CL., 2022, Colon Tumors in Enterotoxigenic Bacteroides fragilis (ETBF)-Colonized Mice Do Not Display a Unique Mutational Signature but Instead Possess Host-Dependent Alterations in the APC Gene, Microbiol Spectr., 10(3):e0105522. doi: 10.1128/spectrum.01055-22. PMCID: PMC9241831  PubMed

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Bowman CE, Wolfgang MJ., 2019 Jan, “Role of the malonyl-CoA synthetase ACSF3 in mitochondrial metabolism.” Adv Biol Regul. 71:34-40. Review. PMCID: PMC6347522 PubMed

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Bedsaul, JR., Carter, NM., Deibel, KE., Hutcherson, SM., Jones, TA., Wang, Z., Yang, C., Yang, YK. and Pomerantz, JL., 2018, “Mechanisms of Regulated and Dysregulated CARD11 Signaling in Adaptive Immunity and Disease,” Front Immunol. doi: 10.3389/fimmu.2018.02105. eCollection 2018. Review. PMID: 30283447. PMCID: PMC6156143 PubMed

Zhu, L., Kandasamy, SK., Liao, SE. and Fukunaga, R., 2018, “LOTUS domain protein MARF1 binds CCR4-NOT deadenylase complex to post-transcriptionally regulate gene expression in oocytes,” Nat Commun. 9(1):4031. PMCID: PMC6168497 PubMed 

Schmidt, K., Ralle, M., Schaffer, T., Jayakanthan, S., Bari, B., Muchenditsi, A. and Lutsenko, S., 2018, “ATP7A and ATP7B copper transporters have distinct functions in the regulation of neuronal DOPAMINE-β-HYDROXYLASE,” J Biol Chem. pii: jbc.RA118.004889. PMID: 30341172 PubMed

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Wasilewski, LN., El-Diwany, R., Munshaw, S., Snider, AE., Brady, JK., Osburn, WO., Ray, SC., and Bailey, JR., 2016, “A hepatitis C virus envelope polymorphism confers resistance to neutralization by polyclonal sera and broadly neutralizing monoclonal antibodies,” J Virol. pii: JVI.02837-15. PubMed

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Pedersen, SM., Chan, W., Jattani, RP., Mackie, DS., and Pomerantz, JL., 2016,  “Correction for Pedersen et al., Regulation of CARD11 Signaling and Lymphoma Cell Survival by the E3 Ubiquitin Ligase RNF181,” Mol Cell Biol. 36(8):1322.​​ PubMed

Jattani, RP., Tritapoe, JM., and Pomerantz, JL., 2016, “Intramolecular Interactions and Regulation of Cofactor Binding by the Four Repressive Elements in the Caspase Recruitment Domain-Containing Protein 11 (CARD11) Inhibitory Domain,” J Biol Chem. pii: jbc.M116.717322.​​PubMed

Lee, J., Choi, J., Aja, S., Scafidi, S., and Wolfgang, MJ., 2016, “Loss of Adipose Fatty Acid Oxidation Does Not Potentiate Obesity at Thermoneutrality,” Cell Rep. 14(6):1308-16.​ PMCID: PMC4758873 PubMed

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Meier, EL., Razavi, S., Inoue, T., and Goley, ED., 2016, “A novel membrane anchor for FtsZ is linked to cell wall hydrolysis in Caulobacter crescentus,” Mol Microbiol.​ ​ PubMed

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Bowman, CE., Zhao, L., Hartung, T., and Wolfgang, MJ., 2016, “Requirement for the Mitochondrial Pyruvate Carrier in Mammalian Development Revealed by a Hypomorphic Allelic Series,” Mol Cell Biol. 36(15):2089-104. PMCID: PMC4946427 PubMed 

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Sun, G. j, Zhou, Y., Ito, S., Bonaguidi, M. a, O’Brien, G. s, Kawasaki, N., Modak, N., Zhu, Y., Ming, G.-L., Song, H., “Latent tri-lineage potential of adult neural stem cells in the hippocampus revealed by Nf1 inactivation”, Nature Neuroscience, 2015 Dec;18(12):1722-4. PMID: 26523645 PubMed

Ward, MD. and Leahy, DJ., 2015, “Kinase activator-receiver preference in ErbB heterodimers is determined by intracellular regions and is not coupled to extracellular asymmetry,” J Biol Chem. 290(3):1570-9. PMCID: PMC4340403 PubMed

Deng, K., Pertea, M., Rongvaux, A., Wang, L., Durand, CM., Ghiaur, G., Lai, J., McHugh, HL., Hao, H., Zhang, H., Margolick, JB., Gurer, C., Murphy, AJ., Valenzuela, DM., Yancopoulos, GD., Deeks, SG., Strowig, T., Kumar, P., Siliciano, JD., Salzberg, SL., Flavell, RA., Shan, L. and Siliciano, RF, 2015, “Broad CTL response is required to clear latent HIV-1 due to dominance of escape mutations,” Nature.15;517(7534):381-5. PMCID: PMC4406054  PubMed

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Dancy, BM. and Cole, PA., 2015, “Protein Lysine Acetylation by p300/CBP,” Chem Rev, 115(6):2419-52. PMCID: PMC4378506 PubMed

Goodrich, AC. and Frueh, DP., 2015, “A Nuclear Magnetic Resonance Method for Probing Molecular Influences of Substrate Loading in Nonribosomal Peptide Synthetase Carrier Proteins. Biochemistry, 54, 1154-6.  PMCID: PMC4378656 PubMed

Harr, JC.*, Luperchio, TR.*, Wong, X.*, Cohen, E*., Wheelan, SJ. and Reddy, KL., 2015, “Directed targeting of chromatin to the nuclear lamina is mediated by chromatin state and A-type lamins,” J Cell Biol. 208(1):33-52. PMCID: PMC4284222 *equal contribution.​ PubMed​

Surcel, A., Ng, WP., West-Foyle, H., Zhu, Q., Ren, Y., Avery, LB., Krenc, AK., Meyers, DJ., Rock, RS., Anders, RA., Freel, Meyers, CL. and Robinson, DN., 2015, “Pharmacological activation of myosin II paralogs to correct cell mechanics defects,” Proc Natl Acad Sci USA, 112(5):1428-33.  PMCID: PMC4321244 PubMed​

Clister, T., Mehta, S. and Zhang, J., 2015, “Single-cell Analysis of G-protein Signal Transduction,” J Biol Chem, 290(11):6681-8. PMCID: PMC4358091 PubMed

Koutmou, K.S., Schuller, A.P., Brunelle, J.L., Radhakrishnan, A., Djuranovic, S. & Green, R. Ribosomes slide on lysine-encoding homopolymeric A stretches. eLife, e05534 (2015). . PMCID: PMC4363877 PubMed​

Lu, YW. and Claypool, SM., 2015, “Disorders of phospholipid metabolism: an emerging class of mitochondrial disease due to defects in nuclear genes,” Front Genet. 2015 Feb 3;6:3 PMCID: PMC4315098  PubMed​

Lei, X.*, Li, Q., Rodriguez, S.*, Tan, SY.*, Seldin, MM.*, McLenithan, JC., Jia, W. and Wong, GW., 2015, “Thromboxane synthase deficiency improves insulin action and attenuates adipose tissue fibrosis,” Am J Physiol Endocrinol Metab. 308(9):E792-804 *equal contribution PubMed

Cox, E., Uzoma, I., Guzzo, C., Jeong, JS., Matunis, M., Blackshaw, S. and Zhu, H., 2015, “Identification of SUMO E3 Ligase-Specific Substrates Using the HuProt Human Proteome Microarray,” Methods Mol Biol. 1295:455-63. PMCID: unknown PubMed

Zhou, X., Clister, TL., Lowry, PR., Seldin, MM., Wong, GW. and Zhang, J., 2015, “Dynamic Visualization of mTORC1 Activity in Living Cells,” Cell Rep. pii: S2211-1247(15)00177-1. PMCID: PMC4567530  PubMed

Eginton C, Cressman WJ, Bachas S, Wade H, Beckett D. Allosteric Coupling via Distant Disorder-to-Order Transitions. J Mol Biol. 2015 Apr 24;427(8):1695-1704. doi: 10.1016/j.jmb.2015.02.021. Epub 2015 Mar 4. PubMed

Deng, H., Wang, W., Yu, J., Zheng, Y., Qing, Y., and Pan, D., 2015, “Spectrin regulates Hippo signaling by modulating cortical actomyosin activity,”  ELife, 4:e06567.  PMCID: PMC4412106  PubMed

Yoo, SW., Motari, MG., Susuki, K., Prendergast, J., Mountney, A., Hurtado, A. and Schnaar, RL., 2015 “Sialylation regulates brain structure and function,” FASEB J. 29(7):3040-53. PMCID: PMC4478807 PubMed​

Metcalf, Pate, KA., Pohlmeyer, CW., Walker-Sperling, VE., Foote, JB., Najarro, KM., Cryer, CG., Salgado, M., Gama, L., Engle, EL., Shirk, EN., Queen, SE., Chioma, S., Vermillion, MS., Bullock, B., Li, M., Lyons, CE., Adams, RJ., Zink, MC., Clements, JE., Mankowski, JL. and Blankson, JN., 2015, “A murine viral outgrowth assay to detect residual HIV-1 in patients with undetectable viral loads,” J Infect Dis. 212:1387-1396. PMCID: PMC4601916 ​ PubMed

Onguka, O., Calzada, E., Ogunbona, OB. and Claypool, SM., 2015, “Phosphatidylserine Decarboxylase 1 Autocatalysis and Function Does Not Require a Mitochondrial-specific Factor,” J Biol Chem, 290: 12744-52  PMCID: PMC4432291  PubMed​

Li, Z., He, SQ., Tseng, PY., Xu, Q., Tiwari, V., Yang, F., Shu, B., Zhang, T., Tang, Z., Raja, SN., Wang, Y., Dong, X. and Guan, Y., 2015, “The inhibition of high-voltage-activated calcium current by activation of MrgC11 involves phospholipase C-dependent mechanisms,” Neuroscience, 300:393-403. PMCID: PMC4485588  PubMed​

Zhang, W., Wu, J., Ward, MD., Yang, S., Chuang, YA., Xiao, M., Li, R., Leahy, DJ. and Worley, PF., 2015, “Structural basis of arc binding to synaptic proteins: implications for cognitive disease.” Neuron. 22;86(2):490-500. PMCID: PMC4409568 PubMed

Kurbanov, F., Kim, Y., Latanich, R., Chaudhari, P., El-Diwany, R., Knabel, M., Kandathil, AJ., Cameron, A., Cox, A., Jang, YY., Thomas, DL. and Balagopal, A., 2015, “IFNL3 genotype is associated with differential induction of IFNL3 in primary human hepatocytes,” Antivir Ther. doi: 10.3851/IMP2974. [Epub ahead of print]  PMCID: unknownPubMed

Hasan, S., Hétié, P amd Matunis, EL., 2015, “Niche signaling promotes stem cell survival in the Drosophila testis via the JAK-STAT target DIAP1,” Dev Biol, 404(1):27-39 PMCID: PMC4469572 PubMed

Westerbeck, JW. and Machamer, CE., 2015, “A Coronavirus E Protein is Present in Two Distinct Pools with Different Effects on Assembly and the Secretory Pathway,” J Virol., 89:18.  PMCID: PMC4542375  PubMed

Zhou, Y., Williams, J., Smallwood, PM. and Nathans, J., 2015, “Sox7, Sox17, and Sox18 Cooperatively Regulate Vascular Development in the Mouse Retina,” PLoS One. 10(12):e0143650.​ ​ PubMed

Lim, C., Gandhi, S., Biniossek, ML., Feng, L., Schilling, O., Urban, S., and Chen, X., 2015, “An Aminopeptidase in the Drosophila Testicular Niche Acts in Germline Stem Cell Maintenance and Spermatogonial Dedifferentiation,” Cell Rep. 13(2):315-25. PMCID: PMC4607668 PubMed

Subramanian, M., Timmerman, CK., Schwartz, J.L., Pham, DL. and Meffert, MK., 2015, “Characterizing autism spectrum disorders by key biochemical pathways,” Front Neurosci. 9:313.  Review. PMCID: PMC4586332 . PubMed

Lambrus, BG., Uetake, Y., Clutario, KM., Daggubati, V., Snyder, M., Sluder, G. and Holland, AJ., 2015, “p53 protects against genome instability following centriole duplication failure,” J Cell Biol., 210(1):63-77. PMCID: PMC4494000  PubMed

Hobbs, RP., DePianto, DJ., Jacob, JT., Han, MC., Chung, BM., Batazzi, AS., Poll, BG., Guo, Y., Han, J., Ong, S., Zheng, W., Taube, JM., Čiháková, D., Wan, F. and Coulombe, PA. 2015, “Keratin-dependent regulation of Aire and gene expression in skin tumor keratinocytes,” Nat Genet. 47(8):933-8. PMCID: PMC4520766 ​PubMed​

Moore,CD.*, Ajala, OZ.* and Zhu, H., 2015, “Applications in high-content functional protein microarrays,” Curr Opin Chem Biol. 30:21-27.  Review. *equal contribution PubMed

Echeverria, I., Liu, Y., Gabelli, SB., and Amzel, LM., 2015, “Oncogenic mutations weaken the interactions that stabilize the p110α-p85α heterodimer in phosphatidylinositol 3-kinase α,” FEBS J. 282(18):3528-42.​ PMCID: PMC4573839 PubMed

Margolis, SS., Sell, GL., Zbinden, MA., and Bird, LM., 2015, “Angelman Syndrome,” Neurotherapeutics. 12(3):641-50.​ ​ PubMed

Ellis, JM., Bowman, CE. and Wolfgang, MJ., 2015, “Metabolic and tissue-specific regulation of acyl-CoA metabolism,” PLoS One. 10(3):e0116587.​ ​ PubMed

Yuan, G.*, Vasavda, C.*, Peng, YJ.*, Makarenko, VV.*, Raghuraman, G., Nanduri, J., Gadalla, MM., Semenza, GL., Kumar, GK., Snyder, SH. and Prabhakar, NR., 2015, “Protein kinase G-regulated production of H2S governs oxygen sensing,” Sci Signal. 8(373):ra37. *equal contribution  PubMed​

Mohammad, F., Woolstenhulme, CJ., Green, R., and Buskirk, AR., 2015, “Clarifying the Translational Pausing Landscape in Bacteria by Ribosome Profiling,” Cell Rep. pii: S2211-1247(15)01529-6.​  PubMed

Metcalf Pate, KA., Pohlmeyer, CW., Walker-Sperling, VE., Foote, JB., Najarro, KM., Cryer, CG., Salgado, M., Gama, L., Engle, EL., Shirk, EN., Queen, SE., Chioma, S., Vermillion, MS., Bullock, B., Li, M., Lyons, CE., Adams, RJ., Zink, MC., Clements, JE., Mankowski, JL., and Blankson, JN., 2015, “A Murine Viral Outgrowth Assay to Detect Residual HIV Type 1 in Patients With Undetectable Viral Loads,” J Infect Dis. 212(9):1387-96. PubMed

de la Peña, AH., Suarez, A., Duong-Ly, KC., Schoeffield, AJ., Pizarro-Dupuy, MA., Zarr, M., Pineiro, SA., Amzel, LM. and Gabelli, SB., 2015, “Structural and Enzymatic Characterization of a Nucleoside Diphosphate Sugar Hydrolase from Bdellovibrio bacteriovorus,” PLoS One, PMID: 26524597 PubMed

Baras, AS., Mitchell, CJ., Myers, JR., Gupta, S., Weng, LC., Ashton, JM., Cornish, TC., Pandey, A. and  Halushka, MK., 2015, “miRge – A Multiplexed Method of Processing Small RNA-Seq Data to Determine MicroRNA Entropy,” PLoS One. PMID: 26571139  PubMed

Phua, SC., Lin, YC. and Inoue, T., 2015, “An intelligent nano-antenna: Primary cilium harnesses TRP channels to decode polymodal stimuli,” Cell Calcium. 58(4):415-22. Review. PMID: 25828566 PubMed​

Lim, C., Gandhi, S., Biniossek, ML., Feng, L., Schilling, O., Urban, S., Chen, X., 2015, An Aminopeptidase in the Drosophila Testicular Niche Acts in Germline Stem Cell Maintenance and Spermatogonial Dedifferentiation. Cell Rep. 13(2):315-25. PMID: 26440886  PubMed

Sundararajan, K.*, Miguel, A., Desmarais, SM., Meier, EL*., Casey, Huang, K. and Goley, ED.*, 2015, “The bacterial tubulin FtsZ requires its intrinsically disordered linker to direct robust cell wall construction,” Nat Commun. 6:7281. PMCID: PMC4532373 *equal contribution​ PubMed

Kurbanov, F., Kim, Y., Latanich, R., Chaudhari, P., El-Diwany, R., Knabel, M., Kandathil, AJ., Cameron, A., Cox, A., Jang, YY., Thomas, DL. and Balagopal, A., 2015, “IFNL3 genotype is associated with differential induction of IFNL3 in primary human hepatocytes,” Antivir Ther. doi: 10.3851/IMP2974. [Epub ahead of print]  PMCID: unknown PubMed

Greenspan, LJ., de Cuevas, M. and Matunis, E., 2015, “Genetics of gonadal stem cell renewal,” Annu Rev Cell Dev Biol. 31:291-315. PMID: 26355592 PubMed​

Lee, CF., Lo, YC., Cheng, CH., Furtmüller, GJ., Oh, B., Andrade-Oliveira, V., Thomas, AG., Bowman, CE., Slusher, BS., Wolfgang, MJ., Brandacher, G., Powell, JD., 2015, “Preventing Allograft Rejection by Targeting Immune Metabolism,” Cell Rep. 13(4):760-70. PMID: 26489460 PubMed

Mitchell, CJ., Getnet, D., Kim, MS., Manda, SS., Kumar, P., Huang, TC., Pinto, SM., Nirujogi, RS., Iwasaki, M., Shaw, PG., Wu, X., Zhong, J., Chaerkady, R., Marimuthu, A., Muthusamy, B., Sahasrabuddhe, NA., Raju, R., Bowman, C., Danilova, L., Cutler, J., Kelkar, DS., Drake, CG., Prasad, TS., Marchionni, L., Murakami, PN., Scott, AF., Shi, L., Thierry-Mieg, J., Thierry-Mieg, D., Irizarry, R., Cope, L., Ishihama, Y., Wang, C., Gowda, H. and Pandey, A., 2015, “A multi-omic analysis of human naïve CD4+ T cells,” BMC Syst Biol. 9:75. PMID: 26542228 PubMed

Goodrich, A.C., Nichols, S.R., and Frueh, D.P, 2014, “Resonance Assignments and Structure Determination of Large and Challenging Proteins,” Encyclopedia of Magnetic Resonance. 3. 

Zhang, H., Zou, B., Du, F., Xu, K. and Li, M., 2014, “Reporting Sodium Channel Activity using Calcium Flux: Pharmacological Promiscuity of Cardiac Nav1.5,” Mol Pharmacol.87(2):207-17  PMCID: PMC4293450 PubMed

Van den Elzen, A.M.G., Schuller, A., Green, R. and Séraphin, B., 2014, “Dom34-Hbs1 mediated dissociation of inactive 80S ribosomes promotes restart of translation after stress.,” EMBO J. 33, 265-276 (2014). PMCID: PMC3989619 ​PubMed

Davis, C.-H.O., Kim, K.-Y., Bushong, E. a, Mills, E. a, Boassa, D., Shih, T., Kinebuchi, M., Phan, S., Zhou, Y., Bihlmeyer, N. a, Nguyen, J.V., Jin, Y., Ellisman, M.H., Marsh-Armstrong, N., “Transcellular degradation of axonal mitochondria”, Proc Natl Acad Sci U S A. 2014 Jul 1;111(26):9633-8. PMID: 24979790 PubMed

Wang, JT. and Seydoux, G., 2014, “P granules,” Curr Biol. 24(14):R637-8. PubMed

Schaughency, P., Merran, J., and Corden, JL., 2014, “Genome-wide mapping of yeast RNA polymerase II termination,” PLoS Genet. 10(10):e1004632.​ PubMed

Bruner, JK., Zou, B., Zhang, H., Zhang, Y., Schmidt, K. and Li, M., 2014, “Identification of novel small molecule modulators of K2P18.1 two-pore potassium channel,” Eur J Pharmacol. pii: S0014-2999(14)00463-4. PubMed

Clayton, AM., Dong, Y. and Dimopoulos, G., 2014, “The Anopheles innate immune system in the defense against malaria infection,” J Innate Immun. 6(2):169-81. PMCID: PMC3939431 PubMed

Baile, MG., Lu, YW. and Claypool, SM., 2014, “The topology and regulation of cardiolipin biosynthesis and remodeling in yeast,” Chem Phys Lipids, 179:25-31. PMCID: PMC3947685   PubMed

Wang, Y., Wang, JT., Rasoloson, D., Stitzel, ML., O’Connell, KF., Smith, HE. and Seydoux, G., 2014, “Identification of Suppressors of mbk-2/DYRK by Whole-Genome Sequencing,” G3 (Bethesda), 4(2):231-41.  PMCID: PMC3931558  PubMed

Hétié, P., de Cuevas, M. and Matunis, E., 2014, “Conversion of quiescent niche cells to somatic stem cells causes ectopic niche formation in the Drosophila testis,” Cell Rep. 7(3):715-21. PMCID: PMC4080611​ PubMed ​

Shamir, ER. and Ewald, AJ., 2014, “Three-dimensional organotypic culture: experimental models of mammalian biology and disease,” Nat Rev Mol Cell Biol. 15(10):647-64. PMCID: PMC4352326 PubMed

Rodriguez, S., Ellis, JM. and Wolfgang, MJ., 2014, “Chemical-genetic induction of Malonyl-CoA decarboxylase in skeletal muscle,” BMC Biochem. 15:20.  PMCID: PMC4236586 ​PubMed​

Herb, BR., 2014, “Epigenetics as an answer to Darwin’s “special difficulty”,” Front Genet. 5:321. PMCID: PMC4162389 PubMed

Chen, BC., Legant, WR., Wang, K., Shao, L., Milkie, DE., Davidson, MW., Janetopoulos, C., Wu, XS., Hammer, JA. 3rd, Liu, Z., English, BP., Mimori-Kiyosue, Y., Romero, DP., Ritter, AT., Lippincott-Schwartz, J., Fritz-Laylin, L., Mullins, RD., Mitchell, DM., Bembenek, JN., Reymann, AC., Böhme, R., Grill, SW., Wang, JT., Seydoux, G., Tulu, US., Kiehart, DP. and Betzig, E., 2014, “Lattice light-sheet microscopy: imaging molecules to embryos at high spatiotemporal resolution,” Science. 346(6208):1257998. PMCID: PMC4336192 PubMed​

Hua, ZL., Jeon, S., Caterina, MJ. and Nathans, J., 2014, “Frizzled3 is required for the development of multiple axon tracts in the mouse central nervous system,” Proc Natl Acad Sci U S A. 111(29):E3005-14.  PMCID: PMC4115534​ PubMed

Ren, Y., West-Foyle, H., Surcel, A., Miller, C. and Robinson, DN., 2014, “Genetic suppression of a phosphomimic myosin II identifies system-level factors that promote myosin II cleavage furrow accumulation,” Mol Biol Cell. 25(25):4150-65.  PMCID: PMC4263456  PubMed

Salgado, M., Gandhi, S., Buckheit, RW., Berkenblit, GV. and Blankson, JN., 2014, “Evolution of an attenuated HIV-1 isolate in an elite suppressor,” AIDS Res Hum Retroviruses. 30(3):284-8. Epub 2013 Nov 13. PubMed

Cox, PM. and Bumpus, NN., 2014, “Structure-Activity Studies Reveal the Oxazinone Ring Is a Determinant of Cytochrome P450 2B6 Activity Toward Efavirenz,” ACS Med Chem Lett. 5(10):1156-1161. PMCID: PMC4191608 PubMed​

Levine, MS. and Holland, AJ., 2014, “Polo-like kinase 4 shapes up,” Structure, 22(8):1071-3.  PubMed

Kalia, J., Milescu, M., Salvatierra, J., Wagner, J., Klint, JK., King, GF., Olivera, BM. and Bosmans, F., 2014, “From Foe to Friend: Using Animal Toxins to Investigate Ion Channel Function,” J Mol Biol. 427(1):158-75, Review. PMCID: PMC4277912 PubMed

Salvatierra, J., Lee, DA., Zibetti, C., Duran-Moreno, M., Yoo, S., Newman, EA., Wang, H., Bedont, JL., de Melo, J., Miranda-Angulo, AL., Gil-Perotin, S., Garcia-Verdugo, JM. and Blackshaw, S., 2014, “The LIM Homeodomain Factor Lhx2 Is Required for Hypothalamic Tanycyte Specification and Differentiation,” J Neurosci. 34(50):16809-20. PMCID: PMC4261103 PubMed​

Bende, NS., Dziemborowicz, S., Mobli, M., Herzig, V., Gilchrist, J., Wagner, J., Nicholson, GM., King, GF. and Bosmans, F., 2014, “A distinct sodium channel voltage-sensor locus determines insect selectivity of the spider toxin Dc1a,” Nat Commun. 5:4350. PMCID: PMC4115291 PubMed

Stine, RR., Greenspan, LJ., Ramachandran, KV. and Matunis, EL., 2014, “Coordinate Regulation of Stem Cell Competition by Slit-Robo and JAK-STAT Signaling in the Drosophila Testis,” PLoS Genet. 10(11):e1004713. PMCID: PMC4222695  PubMed

Cleveland, TE 4th., McCabe, JM. and Leahy, DJ., 2014, “Detergent-solubilized Patched purified from Sf9 cells fails to interact strongly with cognate Hedgehog or Ihog homologs,” Protein Expr Purif, 104C, 92-102. PMCID: PMC4380871 PubMed

McCabe, JM. and Leahy, DJ., 2014, “Smoothened Goes Molecular: New Pieces in the Hedgehog Signaling Puzzle.” J Biol Chem, 6: 3500-7 PMCID: PMC4319017 PubMed​

Kelkar, DS., Provost, E., Chaerkady, R., Muthusamy, B., Manda, SS., Subbannayya, T., Selvan, LD., Wang, CH., Datta, KK., Woo, S., Dwivedi, SB., Renuse, S., Getnet, D., Huang, TC., Kim, MS.,, Pinto, SM., Mitchell, CJ., Madugundu, AK., Kumar, P., Sharma, J., Advani, J., Dey, G., Balakrishnan, L., Syed, N., Nanjappa, V., Subbannayya, Y., Goel, R., Keshava Prasad, TS., Bafna, V., Sirdeshmukh, R., Gowda, H., Wang, C., Leach, SD. and Pandey, A., 2014, “Annotation of the Zebrafish Genome through an Integrated Transcriptomic and Proteomic Analysis,” Mol Cell Proteomics. 13(11):3184-98. PMCID: PMC4223501 PubMed

Qing, Y., Yin, F., Wang, W., Zheng, Y., Guo, P., Schozer, F., Deng, H., and Pan, D., 2014, “The Hippo effector Yorkie activates transcription by interacting with a histone methyltransferase complex through Ncoa6,” Elife, 3.  PMCID: PMC4118621   PubMed

Mehta, S., Aye-Han, NN., Ganesan, A., Oldach, L., Gorshkov, K. and Zhang, J., 2014, “Calmodulin-controlled spatial decoding of oscillatory Ca2+ signals by calcineurin,” Elife. 3:e03765. PMCID: PMC4141273 PubMed

Berk, JM., Simon, DN., Jenkins-Houk, CR., Westerbeck, JW., Grønning-Wang, LM., Carlson, CR. and Wilson, KL., 2014, “The molecular basis of emerin-emerin and emerin-BAF interactions,” J Cell Sci. 127(Pt 18):3956-69. PMCID: PMC4163644 PubMed

Zhou, Y. and Nathans, J., 2014, “Gpr124 controls CNS angiogenesis and blood-brain barrier integrity by promoting ligand-specific canonical wnt signaling,” Dev Cell. 31(2):248-56. PMCID: PMC4223636  PubMed

Rattner, A., Wang, Y., Zhou, Y., Williams, J. and Nathans, JH., 2014, “The role of the hypoxia response in shaping retinal vascular development in the absence of Norrin/Frizzled4 signaling,” Invest Ophthalmol Vis Sci. 55(12):8614-25. PMCID: PMC4280883  PubMed

Wang, J. T., Smith, J., Chen, B.-C., Schmidt, H., Rasoloson, D., Paix, A., Lambrus, BG., Calidas, D., Betzig, E., and Seydoux, G., 2014, “Regulation of RNA granule dynamics by phosphorylation of serine-rich, intrinsically-disordered proteins in C. elegans,” eLife, 3: e04591. PMCID: PMC4296509 PubMed

Heydarian, M., Luperchio, TR., Cutler, J., Mitchell, CJ., Kim, M., Pandey, A., Sollner-Webb, B. and Reddy, K., 2014, “Prediction of Gene Activity in Early B Cell Development Based on an Integrative Multi-Omics Analysis,” J Proteomics Bioinform. 7. pii: 1000302. PMCID: PMC4276347 PubMed

Tu-Sekine, B., Goldschmidt, H. and Raben, DM., 2014, “Diacylglycerol, phosphatidic acid, and their metabolic enzymes in synaptic vesicle recycling,” Adv Biol Regul, 57:147-52. PubMed

Lu, C., Ward, A., Bettridge, J., Liu, Y. and Desiderio, S., 2014, “An Autoregulatory Mechanism Imposes Allosteric Control on the V(D)J Recombinase by Histone H3 Methylation,” Cell Rep.10(1):29-38 PMCID: PMC4308961 PubMed

Freed, D., Stevens, EL. and Pevsner, J., 2014, “Somatic mosaicism in the human genome,” Genes (Basel). 5(4):1064-94. Review. PMCID: PMC4276927 PubMed

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Suarez, A., Ueno, T., Huebner, R., McCaffery, JM. and Inoue, T., 2014, “Bin/Amphiphysin/Rvs (BAR) family members bend membranes in cells,” Sci Rep. 4:4693.   PubMed

Cross, BM., Breitwieser, GE., Reinhardt, TA. and Rao, R., 2014, “Cellular calcium dynamics in lactation and breast cancer: from physiology to pathology,” Am J Physiol Cell Physiol. 306(6):C515-26. PMCID: PMC3948975 PubMed​

Wong, X., Luperchio, TR. and Reddy, KL., 2014, “NET gains and losses: the role of changing nuclear envelope proteomes in genome regulation,” Curr Opin Cell Biol. 28C:105-120.  Review.​ PubMed

Colis, L., Peltonen, K., Sirajuddin, P., Liu, H., Sanders, S., Ernst, G., Barrow, JC. and Laiho, M., 2014, “DNA intercalator BMH-21 inhibits RNA polymerase I independent of DNA damage response,” Oncotarget, 5(12):4361-4369. PMCID: PMC4147329 PubMed

Davis, CH., Kim, KY., Bushong, EA., Mills, EA., Boassa, D., Shih, T., Kinebuchi, M., Phan, S., Zhou, Y., Bihlmeyer, NA., Nguyen, JV., Jin, Y., Ellisman, MH. and Marsh-Armstrong, N., 2014, “Transcellular degradation of axonal mitochondria,” Proc Natl Acad Sci U S A. 111(26):9633-8.  PMCID: PMC4084443 PubMed

Guzzo, CM., Ringel, A., Cox, E., Uzoma, I., Zhu, H., Blackshaw, S., Wolberger, C. and Matunis, MJ., 2014, “Characterization of the SUMO-Binding Activity of the Myeloproliferative and Mental Retardation (MYM)-Type Zinc Fingers in ZNF261 and ZNF198,” PLoS One. 9(8):e105271. PMCID: PMC4136804​ PubMed

Kuang, Z., Cai, L., Zhang, X., Ji, H., Tu, BP. and Boeke, JD., 2014, “High-temporal-resolution view of transcription and chromatin states across distinct metabolic states in budding yeast,” Nat Struct Mol Biol. 21(10):854-63  PMCID: PMC4190017 ​ PubMed

Papazyan, R., Voronina, E., Chapman, JR., Luperchio, TR., Gilbert, TM., Meier, E., Mackintosh, SG., Shabanowitz, J., Tackett, AJ., Reddy, KL., Coyne, RS., Hunt, DF., Liu, Y. and Taverna, SD., 2014, “Methylation of histone H3K23 blocks DNA damage in pericentric heterochromatin during meiosis,” Elife. 3:e02996. PMCID: PMC4141274 PubMed

Cieniewicz, AM., Moreland, L., Ringel, AE., Mackintosh, SG., Raman, A., Gilbert, TM., Wolberger, C., Tackett, AJ. and Taverna, SD., 2014, “The bromodomain of Gcn5 regulates site-specificity of lysine acetylation on histone H3,” Mol Cell Proteomics,13(11):2896-910.  PMCID: PMC4223480 PubMed

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Kim, YS., Chu, Y., Han, L., Li, M., Li, Z., Lavinka, PC., Sun, S., Tang, Z., Park, K., Caterina, MJ., Ren, K., Dubner, R., Wei, F. and Dong, X., 2014, “Central Terminal Sensitization of TRPV1 by Descending Serotonergic Facilitation Modulates Chronic Pain,” Neuron, 81(4):873-87.  PMCID: PMC3943838 PubMed

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Paix, A., Wang, Y., Smith, H., Lee, CY., Calidas, D., Lu, T., Smith, J., Schmidt, H., Krause, M. and Seydoux, G., 2014, “Scalable and Versatile Genome Editing Using Linear DNAs with Micro-homology to Cas9 Sites in Caenorhabditis elegans,” Genetics, 198(4):1347-56.  PMCID: PMC4256755 PubMed

Li, Z., He, SQ., Xu, Q., Yang, F., Tiwari, V., Liu, Q., Tang, Z., Han, L., Chu, YX., Wang, Y., Hin, N., Tsukamoto, T., Slusher, B., Guan, X., Wei, F., Raja, SN., Dong, X. and Guan, Y., 2014, “Activation of MrgC receptor inhibits N-type calcium channels in small-diameter primary sensory neurons in mice,” Pain, 155(8):1613-21. PMCID: PMC4104261  PubMed

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Brubaker, SW., Gauthier, AE., Mills, EW., Ingolia, NT. and Kagan, JC.,  2014, “A Bicistronic MAVS Transcript Highlights a Class of Truncated Variants in Antiviral Immunity,” Cell. 2014 Feb 13;156(4):800-11. doi: 10.1016/j.cell.2014.01.021. PMCID: PMC3959641 PubMed

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Hodge, DL., Berthet, C., Coppola, V., Kastenmüller, W., Buschman, MD., Schaughency, PM., Shirota, H., Scarzello, AJ., Subleski, JJ., Anver, MR., Ortaldo, JR., Lin, F., Reynolds, DA., Sanford, ME., Kaldis, P., Tessarollo, L., Klinman, DM. and Young, HA., 2014, “IFN-gamma AU-rich element removal promotes chronic IFN-gamma expression and autoimmunity in mice,” J Autoimmun. 53:33-45. PMCID: PMC4148478 PubMed

Shamir, ER., Pappalardo, E., Jorgens, DM., Coutinho, K., Tsai, WT., Aziz, K., Auer, M., Tran, PT., Bader, JS. and Ewald, AJ., 2014, “Twist1-induced dissemination preserves epithelial identity and requires E-cadherin,” J Cell Biol. 204(5):839-56. PMCID: PMC3941052 PubMed

Sluch, VM. and Zack, DJ. 2014, “Stem cells, retinal ganglion cells and glaucoma,” Dev Ophthalmol. 53:111-21. PMCID: PMC4547935  PubMed

Kim, MS., Pinto, SM., Getnet, D., Nirujogi, RS., Manda, SS., Chaerkady, R., Madugundu, AK., Kelkar, DS., Isserlin, R., Jain, S., Thomas, JK., Muthusamy, B., Leal-Rojas, P., Kumar, P., Sahasrabuddhe, NA., Balakrishnan, L., Advani, J., George, B., Renuse, S., Selvan, LD., Patil, AH., Nanjappa, V., Radhakrishnan, A., Prasad, S., Subbannayya, T., Raju, R., Kumar, M., Sreenivasamurthy, SK., Marimuthu, A., Sathe, GJ., Chavan, S., Datta, KK., Subbannayya, Y., Sahu, A., Yelamanchi, SD., Jayaram, S., Rajagopalan, P., Sharma, J., Murthy, KR., Syed, N., Goel, R., Khan, AA., Ahmad, S., Dey, G., Mudgal, K., Chatterjee, A., Huang, TC., Zhong, J., Wu, X., Shaw, PG., Freed, D., Zahari, MS., Mukherjee, KK., Shankar, S., Mahadevan, A., Lam, H., Mitchell, CJ., Shankar, SK., Satishchandra, P., Schroeder, JT., Sirdeshmukh, R., Maitra, A., Leach, SD., Drake, CG., Halushka, MK., Prasad, TS., Hruban, RH., Kerr, CL., Bader, GD., Iacobuzio-Donahue, CA., Gowda, H. and Pandey, A., 2014, “A draft map of the human proteome, “Nature. 509(7502):575-81. PMCID: PMC4403737 PubMed

Chivukula, RR., Shi, G., Acharya, A., Mills, EW., Zeitels, LR., Anandam, JL., Abdelnaby, AA., Balch, GC., Mansour, JC., Yopp, AC., Maitra, A. and Mendell, JT., 2014, “An Essential Mesenchymal Function for miR-143/145 in Intestinal Epithelial Regeneration,” Cell.157(5):1104-16. PMCID: PMC4175516​ PubMed

Salgado, M., Swanson, MD., Pohlmeyer, CW., Buckheit, RW 3rd., Wu, J., Archin, NM., Williams, TM., Margolis, DM., Siliciano, RF., Garcia, JV. and Blankson,  JN., 2014, “HLA-B*57 Elite Suppressor and Chronic Progressor HIV-1 Isolates Replicate Vigorously and Cause CD4+ T cell Depletion in Humanized BLT Mice,” J Virol. 88:3340-3352  PMCID: PMC3957943 PubMed

He, SQ., Han, L., Li, Z., Xu, Q., Tiwari, V., Yang, F., Guan, X., Wang, Y., Raja, SN., Dong, X. and Guan, Y., 2013, “Temporal changes in MrgC expression after spinal nerve injury,” Neuroscience. pii: S0306-4522(13)01065-8. PMCID: PMC3945476 

Lin, YC., Phua, SC., Lin, B. and Inoue, T.,  2013, “Visualizing molecular diffusion through passive permeability barriers in cells: conventional and novel approaches,” Curr Opin Chem Biol. 17(4):663-71. Review. PMCID: PMC3860267 PubMed

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Frueh, DP., Goodrich, AC., Mishra, SH. and Nichols, SR., 2013, “NMR methods for structural studies of large monomeric and multimeric proteins,” Curr Opin Struct Biol., 23, 734-9. PMCID: PMC3805735PubMed

Eyler, DE., Wehner, KA. and Green, R., 2013, “Eukaryotic release factor 3 is required for multiple turnovers of peptide release catalysis by eukaryotic release factor 1,” J Biol Chem., 288(41):29530-8. PMCID: PMC3795251  PubMed

Yu, H., Lin, Z., Mattmann, ME., Zou, B., Terrenoire, C., Zhang, H., Wu, M., McManus, OB., Kass, RS., Lindsley, CW., Hopkins, CR. and Li, M., 2013, “Dynamic subunit stoichiometry confers a progressive continuum of pharmacological sensitivity by KCNQ potassium channels,” Proc Natl Acad Sci U S A. 110(21):8732-7. PMCID: PMC3666726 PubMed

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Wang, Z., Raines, LL., Hooy, RM., Roberson, H., Leahy, DJ. and Cole, PA., 2013, “Tyrosine Phosphorylation of Mig6 Reduces Its Inhibition of the Epidermal Growth Factor Receptor,” ACS Chem Biol. 8(11):2372-6. PMCID: PMC3830645PubMed

Lessard, JC., 2013, “Growth Media for E. coli,” Methods Enzymol. 533:181-9. PMID: 24182923  PubMed

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Salgado, M., Buckheit, R., Gandhi, S., Berkenblit, G., Blankson, J., 2013, “Evolution of an Attenuated HIV-1 Isolate in an Elite Suppressor,” AIDS Res Hum Retroviruses. PubMed

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Abrams, EW., Cheng, YL. and Andrew, DJ., 2013, “Drosophila KDEL Receptor Function in the Embryonic Salivary Gland and Epidermis,” PLoS One. 2013 Oct 18;8(10):e77618. PMCID: PMC3799842 PubMed

Teng, X., Dayhoff-Brannigan, M., Cheng, WC., Gilbert, CE., Sing, CN., Diny, N.L., Wheelan, SJ., Dunham, MJ., Boeke, JD., Pineda, FJ. and Hardwick, JM., 2013, “Genome-wide Consequences of Deleting Any Single Gene,” Mol Cell. 52(4):485-94. PMCID: PMC3975072     PubMed

Rath, P., Lal, B., Ajala, O., Li, Y., Xia, S., Kim, J. and Laterra, J., 2013, “In Vivo c-Met Pathway Inhibition Depletes Human Glioma Xenografts of Tumor-Propagating Stem-Like Cells,” Transl Oncol. 6(2):104-11. Epub 2013 Apr 1. PMCID: PMC3612837      PubMed

Ruch, TR. and Machamer, CE., 2012, “The coronavirus E protein: assembly and beyond,” Viruses, 4(3):363-82. PMCID: PMC3347032 Pubmed 

Baile, MG. and Claypool, SM., 2013, “The power of yeast to model diseases of the powerhouse of the cell,” Front Biosci (Landmark Ed). 18:241-78. Review, PMCID: PMC3874933 PubMed

Zhang, F., Bhat, S., Gabelli, SB., Chen, X., Miller, MS., Nacev, BA., Cheng, YL., Meyers, DJ., Tenney, K., Shim, JS., Crews, P., Amzel, LM., Ma, D. and Liu, JO., 2013, “Pyridinylquinazolines selectively inhibit human methionine aminopeptidase-1 in cells,” J Med Chem. 56(10):3996-4016. PMCID: PMC3714011. PubMed

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Wang, Y., Rattner, A., Zhou, Y., Williams, J., Smallwood, PM. and Nathans, J., 2012, “Norrin/Frizzled4 signaling in retinal vascular development and blood brain barrier plasticity,” Cell. 151(6):1332-44, PMCID: PMC3535266  Pubmed 

Porter, JR., Burg, JS., Espenshade, PJ. and Iglesias, PA., 2012, “Identifying a static nonlinear structure in a biological system using noisy, sparse data,” J Theor Biol. 300:232-41. PMCID: PMC3307847  Pubmed 

Phua, SC., Pohlmeyer, C. and Inoue, T., 2012, “Rapidly relocating molecules between organelles to manipulate small GTPase activity,” ACS Chem Biol. 7(12):1950-5. PMCID: PMC3528809 PubMed

Mularoni, L., Zhou, Y., Bowen, T., Gangadharan, S., Wheelan, SJ. and Boeke, JD., 2012, “Retrotransposon Ty1 integration targets specifically positioned asymmetric nucleosomal DNA segments in tRNA hotspots,” Genome Res. 22(4):693-703. doi: 10.1101/gr.129460.111. Epub 2012 Jan 4, PMCID: PMC3317151Pubmed 

Lessard, JC. and Coulombe, PA., 2012, “Keratin 16-null mice develop palmoplantar keratoderma, a hallmark feature of pachyonychia congenita and related disorders,” J Invest Dermatol,132(5):1384-91. PMCID: PMC3326191 Pubmed 

Ewald, AJ., Huebner, RJ., Palsdottir, H., Lee, JK., Perez, MJ., Jorgens, DM., Tauscher, AN., Cheung, KJ., Werb, Z. and Auer, M., 2012, “Mammary collective cell migration involves transient loss of epithelial features and individual cell migration within the epithelium,” J Cell Sci. 125(Pt 11):2638-54. PMCID: PMC3403234  Pubmed 

Zhong, J., Kim, MS., Chaerkady, R., Wu, X., Huang, TC., Getnet, D., Mitchell, CJ., Palapetta, SM., Sharma, J., O’Meally, RN., Cole, RN., Yoda, A., Moritz, A., Loriaux, MM., Rush, J., Weinstock, DM., Tyner, JW. and Pandey, A., 2012, “TSLP signaling network revealed by SILAC-based phosphoproteomics,” Mol Cell Proteomics. 11(6):M112.017764.PMCID: PMC3433886 Pubmed 

Shirley, MD., Tang, H., Gallione., CJ, Baugher, JD., Frelin, LP., Cohen, B., North, PE., Marchuk, DA., Comi, AM. and Pevsner, J., 2013, “Sturge-Weber syndrome and port-wine stains caused by somatic mutation in GNAQ,” N Engl J Med., 368(21):1971-9.  PMCID: PMC3749068 PubMed

West-Foyle, H. and Robinson, DN., 2012, “Cytokinesis mechanics and mechanosensing,” Cytoskeleton, 69(10):700-709. PMCID: PMC3477504 Pubmed 

Herb, BR., Wolschin, F., Hansen, KD., Aryee, MJ., Langmead, B., Irizarry, R., Amdam, GV., and Feinberg, AP., 2012, “Reversible switching between epigenetic states in honeybee behavioral subcastes,” Nat Neurosci. 15(10):1371-3. PMCID: PMC3518384Pubmed 

Hatori, Y., Clasen, S., Hasan, NM., Barry, AN. and Lutsenko, S., 2012, “Functional partnership of the copper export machinery and glutathione balance in human cells,” J Biol Chem. 2287(32):26678-87. PMCID: PMC3411007 Pubmed 

Zhu, H., Cox, E. and Qian, J.,2012, “Functional protein microarray as molecular decathlete: A versatile player in clinical proteomics,” Proteomics Clin Appl. 6(11-12):548-62.  PMCID: PMC3600421 Pubmed

Jilek, BL., Zarr, M., Sampah, ME., Rabi, SA., Bullen, CK., Lai, J., Shen, L. and Siliciano, RF., 2012, “A quantitative basis for antiretroviral therapy for HIV-1 infection,” Nat Med. 18(3):446-51. PMCID: PMC3296892 Pubmed

Carracedo, A., Weiss, D., Leliaert, AK., Bhasin, M., de Boer, VC., Laurent, G., Adams, AC., Sundvall, M., Song, SJ., Ito, K., Finley, LS., Egia, A., Libermann, T., Gerhart-Hines, Z., Puigserver, P., Haigis, MC., Maratos-Flier, E., Richardson, AL., Schafer, ZT. and Pandolfi, PP., 2012, “A metabolic prosurvival role for PML in breast cancer,” J Clin Invest. 122(9):3088-100. PMCID: PMC3433768  Pubmed

Rotty, JD. and Coulombe PA., 2012, “A wound-induced keratin inhibits Src activity during keratinocyte migration and tissue repair,” J Cell Biol,197(3):381-9. PMCID: PMC3341159  Pubmed

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Ruch, TR. and Machamer, CE., 2012, “A single polar residue and distinct membrane topologies impact the function of the infectious bronchitis coronavirus E protein,” PLoS Pathog., 2012;8(5):e1002674. PMCID: PMC3343006  Pubmed 

Stevens, EL., Heckenberg, G., Baugher, JD., Roberson, ED., Downey, TJ. and Pevsner, J., 2012, “Consanguinity in Centre d’Étude du Polymorphisme Humain (CEPH) pedigrees,” Eur J Hum Genet. 20(6):657-67. PMCID: PMC3355261 Pubmed  

Alammar Zaritsky, L., Gama, L. and Clements, JE., 2012, “Canonical type I IFN signaling in simian immunodeficiency virus-infected macrophages is disrupted by astrocyte-secreted CCL2,” J Immunol. 188(8):3876-85. PMCID: PMC3343693 Pubmed 

Shoemaker, CJ. and Green, R., 2012, “Translation drives mRNA quality control,” Nat Struct Mol Biol. 19(6):594-601. PMCID: PMC4299859 Pubmed 

Becker, T., Franckenberg, S., Wickles, S., Shoemaker, CJ., Anger, A.,  Armache, JP., Sieber, H., Ungewickell, C., Berninghausen, O., Dabarkov, I., Karcher, A., Thomm, M., Hopfner, KP., Green, R. and Beckmann, R., 2012, “Structural basis of highly conserved ribosome recycling in eukaryotes  and archaea,” Nature. 482(7386):501-6. PMID: 22358840 Pubmed 

Simon, DN., Domaradzki, T., Hofmann, WA. and Wilson, KL., 2013, “Lamin A tail modification by SUMO1 is disrupted by familial partial lipodystrophy-causing mutations,” Mol Biol Cell., 24(3):342-50. PMCID: PMC3564541  Pubmed 

Huster, D., Kühne, A., Bhattacharjee, A., Raines, L., Jantsch, V., Noe, J., Schirrmeister, W., Sommerer, I., Sabri, O., Berr, F., Mössner, J., Stieger, B., Caca, K. and Lutsenko, S., 2012, “Diverse functional properties of Wilson disease ATP7B variants,” Gastroenterology. 142(4), 947-956. PMCID: PMC3461965 Pubmed 

Currier, DG., Polk, RC. and Reeves, RH., 2012, “A Sonic hedgehog (Shh) response deficit in trisomic cells may be a common denominator for multiple features of Down syndrome,” Prog Brain Res. 197:223-36. PMCID: PMC4405118 Pubmed 

Rodriguez, S. and Wolfgang, MJ., 2012, “Targeted chemical-genetic regulation of protein stability in vivo,” Chem Biol. 19(3):391-8. PMCID: PMC3314227 Pubmed 

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